EnhancerDB
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  3. rs56050747[chr1:204292348]
Enhancers that have rs56050747[chr1:204292348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204280925 204295275 enh12578
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs56050747[chr1:204292348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204292333 204292348 TFAP2A JASPAR yes 34692619
chr1 204292333 204292348 TFAP2C JASPAR yes 34692620
chr1 204292339 204292352 NFKB1 JASPAR yes 34692626
chr1 204292339 204292352 NFKB2 JASPAR yes 34692627
chr1 204292340 204292351 NFKB1 JASPAR yes 34692628
chr1 204292341 204292352 NFKB1 JASPAR yes 34692629
chr1 204292342 204292353 NFKB1 JASPAR yes 34692630
chr1 204292345 204292360 ZIC3 JASPAR yes 34692631
Genes associated with rs56050747[chr1:204292348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More