EnhancerDB
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  3. rs560520400[chr12:50923988]
Enhancers that have rs560520400[chr12:50923988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560520400[chr12:50923988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923334 50925850 ZNF274 GTRD no Blood (GM12878) 21545030
chr12 50923334 50925850 ZNF274 GTRD no Blood (GM12878) 108031198
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50923401 50924985 ZNF274 GTRD no Blood (GM12878) 21545032
chr12 50923401 50924985 ZNF274 GTRD no Blood (GM12878) 108031201
chr12 50923402 50926073 ZNF274 GTRD no Blood (GM12878) 21545033
chr12 50923402 50926073 ZNF274 GTRD no Blood (GM12878) 108031202
chr12 50923426 50925750 STAT3 GTRD no Blood (OCI-LY7) 21545034
chr12 50923426 50925750 STAT3 GTRD no Blood (OCI-LY7) 108031203
chr12 50923465 50925008 ZNF274 GTRD no Bone Marrow (K562) 21545035
chr12 50923465 50925008 ZNF274 GTRD no Bone Marrow (K562) 108031204
chr12 50923466 50925662 ZNF274 GTRD no Bone Marrow (K562) 21545036
chr12 50923466 50925662 ZNF274 GTRD no Bone Marrow (K562) 108031205
chr12 50923473 50925428 ZNF274 GTRD no Blood (GM12878) 21545037
chr12 50923473 50925428 ZNF274 GTRD no Blood (GM12878) 108031206
chr12 50923494 50925744 ZNF274 GTRD no Blood (GM12878) 21545038
chr12 50923494 50925744 ZNF274 GTRD no Blood (GM12878) 108031207
chr12 50923555 50925033 ZNF274 GTRD no Blood (GM12878) 21545039
chr12 50923555 50925033 ZNF274 GTRD no Blood (GM12878) 108031208
chr12 50923794 50925686 ZNF274 GTRD no Cervix (HeLa-S3) 21545040
chr12 50923794 50925686 ZNF274 GTRD no Cervix (HeLa-S3) 108031209
chr12 50923810 50925770 ZNF274 GTRD no Bone Marrow (K562) 21545041
chr12 50923810 50925770 ZNF274 GTRD no Bone Marrow (K562) 108031210
chr12 50923813 50925708 ZNF274 GTRD no Blood (GM12878) 21545042
chr12 50923813 50925708 ZNF274 GTRD no Blood (GM12878) 108031211
chr12 50923877 50925767 ZNF274 GTRD no Bone Marrow (K562) 21545043
chr12 50923877 50925767 ZNF274 GTRD no Bone Marrow (K562) 108031212
chr12 50923891 50925338 ZNF274 GTRD no Blood (GM12878) 21545044
chr12 50923891 50925338 ZNF274 GTRD no Blood (GM12878) 108031213
chr12 50923891 50925350 ZNF274 GTRD no Blood (GM12878) 21545045
chr12 50923891 50925350 ZNF274 GTRD no Blood (GM12878) 108031214
chr12 50923916 50925622 ZNF274 GTRD no Bone Marrow (K562) 21545046
chr12 50923916 50925622 ZNF274 GTRD no Bone Marrow (K562) 108031215
chr12 50923922 50925643 ZNF274 GTRD no Bone Marrow (K562) 21545047
chr12 50923922 50925643 ZNF274 GTRD no Bone Marrow (K562) 108031216
chr12 50923973 50925793 ZNF274 GTRD no Liver (HepG2) 21545048
chr12 50923973 50925793 ZNF274 GTRD no Liver (HepG2) 108031217
Genes associated with rs560520400[chr12:50923988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More