EnhancerDB
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  3. rs560529647[chr17:75389258]
Enhancers that have rs560529647[chr17:75389258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560529647[chr17:75389258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75388373 75389597 ZNF274 GTRD no Blood (GM12878) 21790353
chr17 75388373 75389597 ZNF274 GTRD no Blood (GM12878) 108298645
chr17 75388373 75389597 ZNF274 GTRD no Blood (GM12878) 108298646
chr17 75388687 75389376 ZNF143 GTRD no Epithelial (MCF-7) 21790385
chr17 75388687 75389376 ZNF143 GTRD no Epithelial (MCF-7) 108298688
chr17 75389243 75389259 NFYA JASPAR yes 56076432
chr17 75389248 75389258 HOXA13 JASPAR yes 56076437
Genes associated with rs560529647[chr17:75389258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More