EnhancerDB
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  3. rs560535690[chr1:54840711]
Enhancers that have rs560535690[chr1:54840711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs560535690[chr1:54840711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54840699 54840717 SRF JASPAR yes 28979584
chr1 54840705 54840719 SPI1 JASPAR yes 28979585
chr1 54840705 54840719 SPIC JASPAR yes 28979586
Genes associated with rs560535690[chr1:54840711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More