EnhancerDB
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  3. rs56054461[chr15:62420347]
Enhancers that have rs56054461[chr15:62420347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 62394745 62423415 enh31435
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56054461[chr15:62420347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 62420343 62420358 RUNX2 JASPAR yes 23882086
chr15 62420344 62420353 RUNX2 JASPAR yes 23882087
chr15 62420344 62420354 RUNX3 JASPAR yes 23882088
Genes associated with rs56054461[chr15:62420347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More