EnhancerDB
  1. Home
  2. SNP
  3. rs560553741[chr1:239979536]
Enhancers that have rs560553741[chr1:239979536]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 239967733 239985595 enh12821
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs560553741[chr1:239979536]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 239979530 239979536 NFE2 TRANSFAC yes 36539528
chr1 239979533 239979539 SP1 TRANSFAC yes 36539529
chr1 239979533 239979543 SP1 JASPAR yes 36539530
chr1 239979536 239979547 EBF1 JASPAR yes 36539531
Genes associated with rs560553741[chr1:239979536], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More