EnhancerDB
  1. Home
  2. SNP
  3. rs560577427[chr1:7609017]
Enhancers that have rs560577427[chr1:7609017]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs560577427[chr1:7609017]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7608609 7609401 SOX2 GTRD no Neural Stem Cells (H9) 107801932
chr1 7609006 7609019 TFAP2A JASPAR yes 26475460
chr1 7609006 7609019 TFAP2B JASPAR yes 26475461
chr1 7609006 7609019 TFAP2C JASPAR yes 26475462
chr1 7609017 7609037 TP53 JASPAR yes 26475463
Genes associated with rs560577427[chr1:7609017], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More