EnhancerDB
  1. Home
  2. SNP
  3. rs560577956[chr17:25840305]
Enhancers that have rs560577956[chr17:25840305]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs560577956[chr17:25840305]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25840293 25840308 FOXA1 JASPAR yes 53639240
chr17 25840294 25840309 FOXP1 JASPAR yes 53639241
chr17 25840295 25840306 FOXP2 JASPAR yes 53639243
chr17 25840295 25840307 FOXC2 JASPAR yes 53639244
chr17 25840296 25840307 FOXB1 JASPAR yes 53639248
chr17 25840296 25840307 FOXC1 JASPAR yes 53639249
chr17 25840297 25840305 FOXO3 JASPAR yes 53639256
chr17 25840297 25840308 FOXA1 JASPAR yes 53639257
chr17 25840303 25840307 YY1 TRANSFAC yes 53639258
Genes associated with rs560577956[chr17:25840305], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More