EnhancerDB
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  3. rs560598986[chr1:19257763]
Enhancers that have rs560598986[chr1:19257763]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560598986[chr1:19257763]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19257758 19257775 BCL6B JASPAR yes 27162462
chr1 19257760 19257764 NFE TRANSFAC yes 27162463
chr1 19257761 19257771 SMAD3 JASPAR yes 27162464
Genes associated with rs560598986[chr1:19257763], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More