EnhancerDB
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  3. rs560627223[chr17:38764466]
Enhancers that have rs560627223[chr17:38764466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
chr17 38764452 38764926 vista24751
VISTA
Transcript factors that have rs560627223[chr17:38764466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257638
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257639
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257640
chr17 38763657 38771002 ZBTB33 GTRD no Lung (A549) 108257641
chr17 38764003 38765269 ZNF274 GTRD no Liver (HepG2) 108257644
chr17 38764003 38765269 ZNF274 GTRD no Liver (HepG2) 108257645
chr17 38764052 38764550 ZNF274 GTRD no Blood (GM12878) 21756713
chr17 38764052 38764550 ZNF274 GTRD no Blood (GM12878) 108257646
chr17 38764052 38764550 ZNF274 GTRD no Blood (GM12878) 108257647
chr17 38764418 38765220 ZNF274 GTRD no Liver (HepG2) 108257648
chr17 38764463 38764474 TBX20 JASPAR yes 21236863
chr17 38764463 38764474 TBX20 JASPAR yes 54231421
Genes associated with rs560627223[chr17:38764466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More