EnhancerDB
  1. Home
  2. SNP
  3. rs560640335[chr1:8533924]
Enhancers that have rs560640335[chr1:8533924]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 8533889 8534027 vista254
VISTA
Transcript factors that have rs560640335[chr1:8533924]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8532771 8534523 ZNF274 GTRD no Blood (GM12878) 107801978
chr1 8533911 8533926 JUND JASPAR yes 26559359
chr1 8533911 8533926 JUND JASPAR yes 118225552
chr1 8533918 8533934 GLIS1 JASPAR yes 26559360
chr1 8533918 8533934 GLIS1 JASPAR yes 118225553
chr1 8533924 8533929 TFAP2A TRANSFAC yes 26559361
chr1 8533924 8533929 TFAP2A TRANSFAC yes 118225554
chr1 8533924 8533930 MZF1 JASPAR yes 26559362
chr1 8533924 8533930 MZF1 JASPAR yes 118225555
Genes associated with rs560640335[chr1:8533924], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More