EnhancerDB
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  3. rs56065370[chr1:205289376]
Enhancers that have rs56065370[chr1:205289376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs56065370[chr1:205289376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205289362 205289376 SPI1 JASPAR yes 34754814
chr1 205289365 205289380 MEF2C JASPAR yes 34754815
chr1 205289368 205289388 RREB1 JASPAR yes 34754816
chr1 205289371 205289377 TCF4 TRANSFAC yes 34754817
chr1 205289371 205289383 FOXI1 JASPAR yes 34754818
chr1 205289373 205289393 RREB1 JASPAR yes 34754819
chr1 205289374 205289395 IRF1 JASPAR yes 34754820
chr1 205289376 205289391 STAT2 JASPAR yes 34754821
Genes associated with rs56065370[chr1:205289376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More