EnhancerDB
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  3. rs560666109[chr5:90612560]
Enhancers that have rs560666109[chr5:90612560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560666109[chr5:90612560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90612547 90612565 RARA JASPAR yes 64192243
chr5 90612554 90612567 NR2F1 JASPAR yes 64192244
chr5 90612558 90612566 CREB1 JASPAR yes 64192245
Genes associated with rs560666109[chr5:90612560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More