EnhancerDB
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  3. rs560677608[chr19:14096478]
Enhancers that have rs560677608[chr19:14096478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14090424 14102535 enh5017
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs560677608[chr19:14096478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14096279 14097289 ZNF274 GTRD no Cervix (HeLa-S3) 108390907
chr19 14096281 14097203 ZNF143 GTRD no Epithelial (MCF-7) 108390908
chr19 14096285 14097287 ZBTB33 GTRD no Lung (A549) 108390909
chr19 14096303 14097219 ZNF274 GTRD no Bone Marrow (K562) 108390910
chr19 14096361 14098301 ZNF143 GTRD no Epithelial (MCF-7) 108390911
chr19 14096380 14097207 ZBTB33 GTRD no Lung (A549) 108390912
chr19 14096383 14098207 ZNF143 GTRD no Epithelial (MCF-7) 108390913
chr19 14096402 14097152 ZNF143 GTRD no Epithelial (MCF-7) 108390914
chr19 14096413 14097180 ZNF274 GTRD no Bone Marrow (K562) 108390915
chr19 14096417 14097174 ZNF143 GTRD no Epithelial (MCF-7) 108390916
chr19 14096447 14097237 ZNF143 GTRD no Epithelial (MCF-7) 108390917
chr19 14096459 14097349 ZBTB33 GTRD no Lung (A549) 108390918
chr19 14096466 14096481 TFAP2A JASPAR yes 112544444
chr19 14096466 14096481 TFAP2C JASPAR yes 112544445
chr19 14096468 14096481 TFAP2A JASPAR yes 112544446
chr19 14096468 14096481 TFAP2B JASPAR yes 112544447
chr19 14096468 14096481 TFAP2C JASPAR yes 112544448
chr19 14096469 14096480 EBF1 JASPAR yes 112544449
chr19 14096472 14096483 ESRRA JASPAR yes 112544450
chr19 14096474 14096493 PAX5 JASPAR yes 112544451
chr19 14096476 14096480 LFA1 TRANSFAC yes 112544452
chr19 14096477 14096494 PAX1 JASPAR yes 112544453
Genes associated with rs560677608[chr19:14096478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More