EnhancerDB
  1. Home
  2. SNP
  3. rs560706029[chr17:62968141]
Enhancers that have rs560706029[chr17:62968141]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560706029[chr17:62968141]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62965673 62968211 ZNF274 GTRD no Cervix (HeLa-S3) 21780321
chr17 62965673 62968211 ZNF274 GTRD no Cervix (HeLa-S3) 108283082
chr17 62966518 62969728 ZBTB33 GTRD no Lung (A549) 21780368
chr17 62966542 62969569 ZNF143 GTRD no Epithelial (MCF-7) 21780369
chr17 62966602 62969622 AR GTRD no Prostate (PC-3) 21780373
chr17 62966708 62968225 ZNF274 GTRD no Bone Marrow (K562) 21780378
chr17 62966730 62969435 ZBTB33 GTRD no Lung (A549) 21780379
chr17 62966769 62968960 ZNF274 GTRD no Cervix (HeLa-S3) 21780382
chr17 62967599 62968879 ZBTB33 GTRD no Brain (SK-N-SH) 21780397
chr17 62967663 62969113 ZBTB33 GTRD no Lung (A549) 21780398
chr17 62967771 62969082 ZBTB33 GTRD no Brain (SK-N-SH) 21780399
chr17 62967925 62969679 ZBTB33 GTRD no Lung (A549) 21780400
chr17 62967973 62968329 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780401
chr17 62968038 62968258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780402
chr17 62968046 62969205 ZBTB33 GTRD no Lung (A549) 21780403
chr17 62968130 62969195 ZNF143 GTRD no Epithelial (MCF-7) 21780404
chr17 62968139 62969054 ZBTB33 GTRD no Lung (A549) 21780405
chr17 62968140 62968155 FOXP1 JASPAR yes 55333329
chr17 62968141 62968156 FOXP1 JASPAR yes 55333330
Genes associated with rs560706029[chr17:62968141], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More