EnhancerDB
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  3. rs560708313[chr6:106589597]
Enhancers that have rs560708313[chr6:106589597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106557885 106599595 enh9272
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube)
chr6 106589555 106589870 vista52994
VISTA
Transcript factors that have rs560708313[chr6:106589597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106589587 106589602 ZIC4 JASPAR yes 70411374
chr6 106589587 106589602 ZIC4 JASPAR yes 104014368
chr6 106589591 106589600 SNAI2 JASPAR yes 70411375
chr6 106589591 106589600 SNAI2 JASPAR yes 104014369
Genes associated with rs560708313[chr6:106589597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More