EnhancerDB
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  3. rs560745613[chr1:25060938]
Enhancers that have rs560745613[chr1:25060938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560745613[chr1:25060938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25060926 25060946 RREB1 JASPAR yes 27525059
chr1 25060928 25060943 FOXA1 JASPAR yes 27525061
chr1 25060929 25060941 FOXI1 JASPAR yes 27525062
chr1 25060929 25060944 FOXP1 JASPAR yes 27525063
chr1 25060930 25060942 FOXC2 JASPAR yes 27525064
chr1 25060932 25060943 FOXA1 JASPAR yes 27525065
chr1 25060933 25060948 FOXP1 JASPAR yes 27525066
chr1 25060934 25060945 FOXP2 JASPAR yes 27525067
chr1 25060934 25060946 FOXC2 JASPAR yes 27525068
chr1 25060934 25060949 STAT2 JASPAR yes 27525069
chr1 25060935 25060950 FOXP1 JASPAR yes 27525070
Genes associated with rs560745613[chr1:25060938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More