EnhancerDB
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Enhancers that have rs560799039[chr1:229296812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229288705 229303375 enh12761
Liver (HepG2) Large Intestine Esophagus Placenta Pancreas Uterus Stomach
chr1 229296726 229296995 vista5453
VISTA
Transcript factors that have rs560799039[chr1:229296812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229296299 229296882 ZNF274 GTRD no Liver (HepG2) 21390552
chr1 229296299 229296882 ZNF274 GTRD no Liver (HepG2) 107877776
chr1 229296316 229297019 TEF1 GTRD no Bone (Osteoblast) 107877777
chr1 229296356 229296819 ZNF274 GTRD no Cervix (HeLa-S3) 107877778
chr1 229296502 229296880 TCF7L2 GTRD no Colon (HCT116) 107877780
chr1 229296793 229296814 IRF1 JASPAR yes 35968338
chr1 229296793 229296814 IRF1 JASPAR yes 118475521
chr1 229296798 229296813 FOXP1 JASPAR yes 35968340
chr1 229296798 229296813 FOXP1 JASPAR yes 118475523
chr1 229296799 229296814 FOXP1 JASPAR yes 35968341
chr1 229296799 229296814 FOXP1 JASPAR yes 118475524
chr1 229296800 229296815 FOXP1 JASPAR yes 35968342
chr1 229296800 229296815 FOXP1 JASPAR yes 118475525
Genes associated with rs560799039[chr1:229296812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More