EnhancerDB
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  3. rs560807457[chr1:25060471]
Enhancers that have rs560807457[chr1:25060471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560807457[chr1:25060471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25060456 25060477 IRF1 JASPAR yes 27524942
chr1 25060458 25060473 STAT2 JASPAR yes 27524943
chr1 25060461 25060482 IRF1 JASPAR yes 27524944
chr1 25060463 25060478 PRDM1 JASPAR yes 27524945
chr1 25060463 25060478 STAT2 JASPAR yes 27524946
chr1 25060464 25060478 SPIC JASPAR yes 27524947
chr1 25060464 25060478 STAT1 JASPAR yes 27524948
chr1 25060465 25060486 IRF1 JASPAR yes 27524949
chr1 25060466 25060481 FOXP1 JASPAR yes 27524950
chr1 25060466 25060487 IRF1 JASPAR yes 27524951
chr1 25060467 25060488 IRF1 JASPAR yes 27524952
chr1 25060468 25060483 FOXP1 JASPAR yes 27524953
chr1 25060468 25060489 IRF1 JASPAR yes 27524954
chr1 25060469 25060490 IRF1 JASPAR yes 27524955
chr1 25060470 25060485 FOXP1 JASPAR yes 27524956
chr1 25060470 25060491 IRF1 JASPAR yes 27524957
chr1 25060471 25060486 FOXP1 JASPAR yes 27524958
chr1 25060471 25060492 IRF1 JASPAR yes 27524959
Genes associated with rs560807457[chr1:25060471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More