EnhancerDB
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  3. rs56081029[chr1:224686582]
Enhancers that have rs56081029[chr1:224686582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56081029[chr1:224686582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224686032 224686622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21384399
chr1 224686032 224686622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873794
chr1 224686133 224686793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384402
chr1 224686133 224686793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107873797
chr1 224686177 224686697 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384403
chr1 224686177 224686697 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873798
chr1 224686212 224686622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21384405
chr1 224686212 224686622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873800
chr1 224686259 224686589 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384408
chr1 224686259 224686589 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873803
chr1 224686264 224686640 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384409
chr1 224686264 224686640 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873804
chr1 224686304 224686740 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21384412
chr1 224686304 224686740 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873807
chr1 224686309 224686629 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384413
chr1 224686309 224686629 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873808
chr1 224686322 224686657 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384414
chr1 224686322 224686657 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873809
chr1 224686347 224686620 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384415
chr1 224686347 224686620 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873810
chr1 224686369 224686689 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21384416
chr1 224686369 224686689 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107873811
chr1 224686394 224686624 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384417
chr1 224686394 224686624 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873812
chr1 224686394 224687030 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384418
chr1 224686394 224687030 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873813
chr1 224686418 224686601 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21384419
chr1 224686418 224686601 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107873814
chr1 224686568 224686583 SOX21 JASPAR yes 35707185
chr1 224686568 224686584 SOX4 JASPAR yes 35707186
Genes associated with rs56081029[chr1:224686582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More