EnhancerDB
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  3. rs560854845[chr3:190296897]
Enhancers that have rs560854845[chr3:190296897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 190295425 190317875 enh21224
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Placenta Uterus Muscle (Myoblast) Breast Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs560854845[chr3:190296897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 190296877 190296898 IRF1 JASPAR yes 8662426
chr3 190296884 190296899 FOXP1 JASPAR yes 8662431
chr3 190296886 190296906 RREB1 JASPAR yes 8662432
chr3 190296888 190296908 RREB1 JASPAR yes 8662433
chr3 190296889 190296901 FOXI1 JASPAR yes 8662435
chr3 190296889 190296904 FOXP1 JASPAR yes 8662436
chr3 190296890 190296902 FOXC2 JASPAR yes 8662437
chr3 190296892 190296903 FOXA1 JASPAR yes 8662438
chr3 190296892 190296912 RREB1 JASPAR yes 8662439
chr3 190296893 190296908 MEF2C JASPAR yes 8662440
chr3 190296893 190296913 RREB1 JASPAR yes 8662441
chr3 190296893 190296914 IRF1 JASPAR yes 8662442
chr3 190296894 190296909 RUNX2 JASPAR yes 8662443
chr3 190296897 190296909 IRF1 JASPAR yes 8662444
chr3 190296897 190296911 IRF7 JASPAR yes 8662445
chr3 190296897 190296912 IRF9 JASPAR yes 8662446
Genes associated with rs560854845[chr3:190296897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More