EnhancerDB
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  3. rs560910961[chr12:125039010]
Enhancers that have rs560910961[chr12:125039010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560910961[chr12:125039010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125038425 125039011 TCF7L2 GTRD no Colon (HCT116) 21581020
chr12 125038425 125039011 TCF7L2 GTRD no Colon (HCT116) 108068913
chr12 125039001 125039021 RREB1 JASPAR yes 124393256
chr12 125039002 125039012 SP1 JASPAR yes 124393258
chr12 125039002 125039012 ZNF740 JASPAR yes 124393259
chr12 125039002 125039023 ZNF263 JASPAR yes 124393260
Genes associated with rs560910961[chr12:125039010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More