EnhancerDB
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  3. rs560930949[chr2:33305234]
Enhancers that have rs560930949[chr2:33305234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 33282385 33305251 enh18430
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs560930949[chr2:33305234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 33305229 33305242 ZBTB18 JASPAR yes 72895217
chr2 33305230 33305246 T JASPAR yes 72895218
chr2 33305231 33305240 SNAI2 JASPAR yes 72895219
chr2 33305231 33305241 FIGLA JASPAR yes 72895220
chr2 33305231 33305241 ID4 JASPAR yes 72895221
chr2 33305231 33305241 TCF3 JASPAR yes 72895222
chr2 33305231 33305241 TCF4 JASPAR yes 72895223
chr2 33305233 33305242 ZEB1 JASPAR yes 72895224
chr2 33305234 33305242 TBX5 JASPAR yes 72895225
Genes associated with rs560930949[chr2:33305234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More