EnhancerDB
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  3. rs560934289[chr1:27885696]
Enhancers that have rs560934289[chr1:27885696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs560934289[chr1:27885696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27881821 27888089 ZNF274 GTRD no Blood (GM12878) 107802589
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27885688 27885704 RFX4 JASPAR yes 27708931
chr1 27885696 27885711 SCRT1 JASPAR yes 27708932
Genes associated with rs560934289[chr1:27885696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More