EnhancerDB
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  3. rs560952302[chr1:231525160]
Enhancers that have rs560952302[chr1:231525160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560952302[chr1:231525160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231525140 231525161 IRF1 JASPAR yes 36088034
chr1 231525146 231525161 FOXP1 JASPAR yes 36088037
chr1 231525147 231525160 POU2F2 JASPAR yes 36088038
Genes associated with rs560952302[chr1:231525160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More