EnhancerDB
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  3. rs560980378[chr12:95728277]
Enhancers that have rs560980378[chr12:95728277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 95726252 95768135 enh2529
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs560980378[chr12:95728277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 95728241 95728501 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21566951
chr12 95728257 95728278 IRF1 JASPAR yes 122986441
chr12 95728259 95728535 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21566952
chr12 95728264 95728471 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21566953
chr12 95728268 95728558 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21566954
chr12 95728275 95728545 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21566955
Genes associated with rs560980378[chr12:95728277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More