EnhancerDB
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  3. rs560996218[chr2:25842542]
Enhancers that have rs560996218[chr2:25842542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25836360 25845235 enh33144
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs560996218[chr2:25842542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25842535 25842550 FOXP1 JASPAR yes 72491436
chr2 25842536 25842551 FOXA1 JASPAR yes 72491437
chr2 25842537 25842548 FOXB1 JASPAR yes 72491438
chr2 25842537 25842548 FOXC1 JASPAR yes 72491439
chr2 25842537 25842549 FOXC2 JASPAR yes 72491440
chr2 25842538 25842549 FOXP2 JASPAR yes 72491441
chr2 25842538 25842550 FOXI1 JASPAR yes 72491442
chr2 25842539 25842543 TEAD2 TRANSFAC yes 72491443
chr2 25842539 25842544 TBP TRANSFAC yes 72491444
chr2 25842540 25842548 FOXG1 JASPAR yes 72491445
chr2 25842540 25842548 FOXO3 JASPAR yes 72491446
Genes associated with rs560996218[chr2:25842542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More