EnhancerDB
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  3. rs560999564[chr1:201516192]
Enhancers that have rs560999564[chr1:201516192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs560999564[chr1:201516192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201513835 201516759 ZNF274 GTRD no Bone Marrow (K562) 107856623
chr1 201514717 201516335 ZNF274 GTRD no Bone Marrow (K562) 107856627
chr1 201514779 201516478 ZNF274 GTRD no Bone Marrow (K562) 107856628
chr1 201514785 201516445 ZNF274 GTRD no Bone Marrow (K562) 107856629
chr1 201515016 201516932 ZNF143 GTRD no Epithelial (MCF-7) 107856635
chr1 201515977 201516224 TCF7L2 GTRD no Colon (HCT116) 21364602
chr1 201516178 201516198 ESR1 JASPAR yes 34505346
chr1 201516181 201516198 RXRA JASPAR yes 34505348
chr1 201516181 201516199 ESR1 JASPAR yes 34505349
chr1 201516181 201516199 ESR2 JASPAR yes 34505350
chr1 201516182 201516199 ESR1 JASPAR yes 34505351
chr1 201516187 201516192 MYC TRANSFAC yes 34505352
chr1 201516192 201516195 MYB TRANSFAC yes 34505353
Genes associated with rs560999564[chr1:201516192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More