EnhancerDB
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  3. rs561013399[chr17:62960865]
Enhancers that have rs561013399[chr17:62960865]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561013399[chr17:62960865]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62960851 62960866 FOXA1 JASPAR yes 55332141
chr17 62960853 62960865 FOXI1 JASPAR yes 55332145
chr17 62960858 62960871 EOMES JASPAR yes 55332146
chr17 62960860 62960870 TBR1 JASPAR yes 55332147
chr17 62960861 62960871 TBX21 JASPAR yes 55332148
chr17 62960862 62960870 TBX15 JASPAR yes 55332149
chr17 62960862 62960870 TBX4 JASPAR yes 55332150
Genes associated with rs561013399[chr17:62960865], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More