EnhancerDB
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  3. rs561028894[chr16:70461241]
Enhancers that have rs561028894[chr16:70461241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70459605 70472113 enh4121
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561028894[chr16:70461241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70461056 70461957 TCF7L2 GTRD no Colon (HCT116) 21712713
chr16 70461056 70461957 TCF7L2 GTRD no Colon (HCT116) 108204296
chr16 70461235 70461256 IRF1 JASPAR yes 11317511
chr16 70461236 70461257 IRF1 JASPAR yes 11317512
chr16 70461237 70461258 IRF1 JASPAR yes 11317513
chr16 70461238 70461253 FOXP1 JASPAR yes 11317514
chr16 70461238 70461259 IRF1 JASPAR yes 11317515
chr16 70461239 70461260 IRF1 JASPAR yes 11317516
chr16 70461240 70461255 FOXP1 JASPAR yes 11317517
chr16 70461241 70461256 FOXP1 JASPAR yes 11317518
Genes associated with rs561028894[chr16:70461241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More