EnhancerDB
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  3. rs561053868[chr1:231526829]
Enhancers that have rs561053868[chr1:231526829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561053868[chr1:231526829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231526817 231526838 IRF1 JASPAR yes 36088231
chr1 231526823 231526843 RREB1 JASPAR yes 36088232
chr1 231526823 231526844 IRF1 JASPAR yes 36088233
chr1 231526824 231526839 FOXP1 JASPAR yes 36088234
chr1 231526825 231526836 FOXP2 JASPAR yes 36088235
chr1 231526825 231526845 RREB1 JASPAR yes 36088236
chr1 231526826 231526841 FOXP1 JASPAR yes 36088237
chr1 231526827 231526847 RREB1 JASPAR yes 36088238
chr1 231526828 231526848 RREB1 JASPAR yes 36088239
Genes associated with rs561053868[chr1:231526829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More