EnhancerDB
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Enhancers that have rs56110950[chr17:78754666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
chr17 78754047 78754707 vista26344
VISTA
Transcript factors that have rs56110950[chr17:78754666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78753766 78754669 ZNF274 GTRD no Blood (GM12878) 21797295
chr17 78753766 78754669 ZNF274 GTRD no Blood (GM12878) 108307543
chr17 78754156 78754752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797314
chr17 78754156 78754752 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307576
chr17 78754246 78754766 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797316
chr17 78754246 78754766 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307579
chr17 78754300 78754736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797320
chr17 78754300 78754736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307583
chr17 78754343 78755003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797324
chr17 78754343 78755003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307587
chr17 78754346 78754676 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797325
chr17 78754346 78754676 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307588
chr17 78754347 78754717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797326
chr17 78754347 78754717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307589
chr17 78754390 78754770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21797329
chr17 78754390 78754770 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108307592
chr17 78754652 78754666 SPI1 JASPAR yes 21315510
chr17 78754652 78754666 SPIC JASPAR yes 21315511
chr17 78754652 78754666 SPI1 JASPAR yes 56278543
chr17 78754652 78754666 SPIC JASPAR yes 56278544
chr17 78754666 78754676 EN2 JASPAR yes 21315513
chr17 78754666 78754676 LBX2 JASPAR yes 21315514
chr17 78754666 78754676 EN2 JASPAR yes 56278546
chr17 78754666 78754676 LBX2 JASPAR yes 56278547
Genes associated with rs56110950[chr17:78754666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More