EnhancerDB
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  3. rs561118200[chr1:210544490]
Enhancers that have rs561118200[chr1:210544490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 210543485 210560329 enh27456
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs561118200[chr1:210544490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 210544480 210544501 IRF1 JASPAR yes 35023029
chr1 210544482 210544497 STAT2 JASPAR yes 35023030
chr1 210544483 210544497 STAT1 JASPAR yes 35023031
chr1 210544484 210544505 IRF1 JASPAR yes 35023032
chr1 210544489 210544504 FOXP1 JASPAR yes 35023033
chr1 210544489 210544510 IRF1 JASPAR yes 35023034
Genes associated with rs561118200[chr1:210544490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More