EnhancerDB
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  3. rs561146340[chr17:57715059]
Enhancers that have rs561146340[chr17:57715059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57699645 57721455 enh4504
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs561146340[chr17:57715059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57715055 57715070 FOXP1 JASPAR yes 55073385
chr17 57715056 57715071 FOXP1 JASPAR yes 55073386
chr17 57715057 57715072 FOXP1 JASPAR yes 55073387
chr17 57715057 57715078 IRF1 JASPAR yes 55073388
chr17 57715058 57715073 FOXP1 JASPAR yes 55073389
chr17 57715059 57715074 FOXP1 JASPAR yes 55073390
chr17 57715059 57715080 IRF1 JASPAR yes 55073391
Genes associated with rs561146340[chr17:57715059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More