EnhancerDB
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  3. rs56115725[chr2:227634742]
Enhancers that have rs56115725[chr2:227634742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227617325 227640615 enh6179
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56115725[chr2:227634742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227634721 227634742 IRF1 JASPAR yes 81494473
chr2 227634739 227634750 CDX2 JASPAR yes 81494474
chr2 227634740 227634751 HOXA10 JASPAR yes 81494475
chr2 227634741 227634750 CDX1 JASPAR yes 81494476
Genes associated with rs56115725[chr2:227634742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More