EnhancerDB
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  3. rs56132422[chr1:227009918]
Enhancers that have rs56132422[chr1:227009918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56132422[chr1:227009918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227009780 227010056 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21387707
chr1 227009882 227010146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387708
chr1 227009912 227009921 SNAI2 JASPAR yes 35848370
chr1 227009912 227009922 ID4 JASPAR yes 35848371
chr1 227009912 227009922 TCF3 JASPAR yes 35848372
chr1 227009912 227009922 TCF4 JASPAR yes 35848373
Genes associated with rs56132422[chr1:227009918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More