EnhancerDB
  1. Home
  2. SNP
  3. rs561340175[chr2:28188516]
Enhancers that have rs561340175[chr2:28188516]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561340175[chr2:28188516]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28188512 28188527 MEF2A JASPAR yes 72603984
chr2 28188514 28188526 MEF2A JASPAR yes 72603985
chr2 28188514 28188526 MEF2B JASPAR yes 72603986
chr2 28188514 28188526 MEF2D JASPAR yes 72603987
chr2 28188515 28188525 MEF2A JASPAR yes 72603988
chr2 28188516 28188524 FOXL1 JASPAR yes 72603989
Genes associated with rs561340175[chr2:28188516], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More