EnhancerDB
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  3. rs561400470[chr16:85361070]
Enhancers that have rs561400470[chr16:85361070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561400470[chr16:85361070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85360070 85362286 ZNF143 GTRD no Epithelial (MCF-7) 21723639
chr16 85360090 85362310 ZNF143 GTRD no Epithelial (MCF-7) 21723640
chr16 85360101 85362374 ZNF143 GTRD no Epithelial (MCF-7) 21723642
chr16 85360572 85361116 ZNF143 GTRD no Epithelial (MCF-7) 21723649
chr16 85360640 85362728 ZNF274 GTRD no Bone Marrow (K562) 21723650
chr16 85360655 85361093 ZNF274 GTRD no Bone Marrow (K562) 21723651
chr16 85360665 85361173 ZNF274 GTRD no Bone Marrow (K562) 21723652
chr16 85360697 85361350 ZNF274 GTRD no Bone Marrow (K562) 21723653
chr16 85361062 85361071 HIC2 JASPAR yes 12047990
chr16 85361063 85361079 ZNF143 JASPAR yes 12047991
chr16 85361064 85361074 SP1 JASPAR yes 12047992
chr16 85361065 85361085 TP63 JASPAR yes 12047994
Genes associated with rs561400470[chr16:85361070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More