EnhancerDB
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  3. rs561402275[chr19:6109427]
Enhancers that have rs561402275[chr19:6109427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561402275[chr19:6109427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 21844676
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 108377211
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 108377212
chr19 6108198 6109816 ZNF274 GTRD no Bone Marrow (K562) 21844677
chr19 6108198 6109816 ZNF274 GTRD no Bone Marrow (K562) 108377213
chr19 6108198 6109816 ZNF274 GTRD no Bone Marrow (K562) 108377214
chr19 6108382 6110286 ZNF274 GTRD no Bone Marrow (K562) 21844679
chr19 6108382 6110286 ZNF274 GTRD no Bone Marrow (K562) 108377217
chr19 6108382 6110286 ZNF274 GTRD no Bone Marrow (K562) 108377218
chr19 6108391 6109717 ZNF274 GTRD no Blood (GM12878) 108377219
chr19 6108391 6109717 ZNF274 GTRD no Blood (GM12878) 108377220
chr19 6108470 6109746 ZNF143 GTRD no Epithelial (MCF-7) 21844681
chr19 6108470 6109746 ZNF143 GTRD no Epithelial (MCF-7) 108377223
chr19 6108470 6109746 ZNF143 GTRD no Epithelial (MCF-7) 108377224
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 21844682
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377225
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377226
chr19 6108491 6109546 ZBTB33 GTRD no Brain (SK-N-SH) 21844684
chr19 6108491 6109546 ZBTB33 GTRD no Brain (SK-N-SH) 108377229
chr19 6108491 6109546 ZBTB33 GTRD no Brain (SK-N-SH) 108377230
chr19 6108494 6109469 ZBTB33 GTRD no Brain (SK-N-SH) 21844685
chr19 6108494 6109469 ZBTB33 GTRD no Brain (SK-N-SH) 108377231
chr19 6108494 6109469 ZBTB33 GTRD no Brain (SK-N-SH) 108377232
chr19 6108526 6109438 ZNF274 GTRD no Blood (GM12878) 108377239
chr19 6108526 6109438 ZNF274 GTRD no Blood (GM12878) 108377240
chr19 6108537 6109667 ZNF274 GTRD no Bone Marrow (K562) 21844689
chr19 6108537 6109667 ZNF274 GTRD no Bone Marrow (K562) 108377243
chr19 6108537 6109667 ZNF274 GTRD no Bone Marrow (K562) 108377244
chr19 6108539 6109445 ZNF274 GTRD no Blood (GM12878) 108377245
chr19 6108539 6109445 ZNF274 GTRD no Blood (GM12878) 108377246
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 21844690
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377247
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377248
chr19 6108558 6109504 TCF7L2 GTRD no Colon (HCT116) 21844692
chr19 6108558 6109504 TCF7L2 GTRD no Colon (HCT116) 108377251
chr19 6108558 6109504 TCF7L2 GTRD no Colon (HCT116) 108377252
chr19 6108585 6109557 ZNF274 GTRD no Bone Marrow (K562) 21844695
chr19 6108585 6109557 ZNF274 GTRD no Bone Marrow (K562) 108377257
chr19 6108585 6109557 ZNF274 GTRD no Bone Marrow (K562) 108377258
chr19 6108588 6109435 ZBTB33 GTRD no Lung (A549) 21844696
chr19 6108588 6109435 ZBTB33 GTRD no Lung (A549) 108377259
chr19 6108588 6109435 ZBTB33 GTRD no Lung (A549) 108377260
chr19 6108588 6109723 ZBTB33 GTRD no Lung (A549) 21844697
chr19 6108588 6109723 ZBTB33 GTRD no Lung (A549) 108377261
chr19 6108588 6109723 ZBTB33 GTRD no Lung (A549) 108377262
chr19 6108588 6109746 ZNF274 GTRD no Bone Marrow (K562) 21844698
chr19 6108588 6109746 ZNF274 GTRD no Bone Marrow (K562) 108377263
chr19 6108588 6109746 ZNF274 GTRD no Bone Marrow (K562) 108377264
chr19 6108626 6109479 ZNF274 GTRD no Bone Marrow (K562) 21844699
chr19 6108626 6109479 ZNF274 GTRD no Bone Marrow (K562) 108377266
chr19 6108626 6109479 ZNF274 GTRD no Bone Marrow (K562) 108377267
chr19 6108627 6109477 TCF7L2 GTRD no Colon (HCT116) 21844700
chr19 6108627 6109477 TCF7L2 GTRD no Colon (HCT116) 108377268
chr19 6108627 6109477 TCF7L2 GTRD no Colon (HCT116) 108377269
chr19 6108692 6109511 ZNF274 GTRD no Blood (GM12878) 108377286
chr19 6108692 6109511 ZNF274 GTRD no Blood (GM12878) 108377287
chr19 6108692 6109512 TCF7L2 GTRD no Colon (HCT116) 21844708
chr19 6108692 6109512 TCF7L2 GTRD no Colon (HCT116) 108377288
chr19 6108692 6109512 TCF7L2 GTRD no Colon (HCT116) 108377289
chr19 6108712 6109479 ZBTB33 GTRD no Lung (A549) 21844710
chr19 6108712 6109479 ZBTB33 GTRD no Lung (A549) 108377294
chr19 6108712 6109479 ZBTB33 GTRD no Lung (A549) 108377295
chr19 6108712 6109608 ZNF274 GTRD no Bone Marrow (K562) 21844711
chr19 6108712 6109608 ZNF274 GTRD no Bone Marrow (K562) 108377296
chr19 6108712 6109608 ZNF274 GTRD no Bone Marrow (K562) 108377297
chr19 6108719 6109566 ZNF274 GTRD no Bone Marrow (K562) 21844712
chr19 6108719 6109566 ZNF274 GTRD no Bone Marrow (K562) 108377298
chr19 6108719 6109566 ZNF274 GTRD no Bone Marrow (K562) 108377299
chr19 6108761 6109559 ZNF274 GTRD no Bone Marrow (K562) 21844720
chr19 6108761 6109559 ZNF274 GTRD no Bone Marrow (K562) 108377316
chr19 6108761 6109559 ZNF274 GTRD no Bone Marrow (K562) 108377317
chr19 6108885 6109471 ZNF274 GTRD no Bone Marrow (K562) 21844726
chr19 6108885 6109471 ZNF274 GTRD no Bone Marrow (K562) 108377352
chr19 6108885 6109471 ZNF274 GTRD no Bone Marrow (K562) 108377353
chr19 6109003 6109561 ZNF143 GTRD no Epithelial (MCF-7) 21844733
chr19 6109003 6109561 ZNF143 GTRD no Epithelial (MCF-7) 108377367
chr19 6109086 6109460 ZNF274 GTRD no Bone Marrow (K562) 21844734
chr19 6109086 6109460 ZNF274 GTRD no Bone Marrow (K562) 108377368
chr19 6109151 6109484 ZBTB33 GTRD no Brain (SK-N-SH) 21844735
chr19 6109151 6109484 ZBTB33 GTRD no Brain (SK-N-SH) 108377369
chr19 6109205 6109473 ZNF274 GTRD no Bone Marrow (K562) 21844737
chr19 6109205 6109473 ZNF274 GTRD no Bone Marrow (K562) 108377371
chr19 6109214 6109502 ZNF143 GTRD no Epithelial (MCF-7) 21844738
chr19 6109214 6109502 ZNF143 GTRD no Epithelial (MCF-7) 108377372
chr19 6109222 6109577 ZNF274 GTRD no Bone Marrow (K562) 21844739
chr19 6109222 6109577 ZNF274 GTRD no Bone Marrow (K562) 108377373
Genes associated with rs561402275[chr19:6109427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More