EnhancerDB
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  3. rs561413642[chr5:173339921]
Enhancers that have rs561413642[chr5:173339921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173338825 173358415 enh22829
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs561413642[chr5:173339921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173339918 173339933 FOXP1 JASPAR yes 67921102
chr5 173339919 173339934 FOXP1 JASPAR yes 67921103
chr5 173339920 173339935 FOXP1 JASPAR yes 67921104
chr5 173339920 173339941 IRF1 JASPAR yes 67921105
chr5 173339921 173339936 FOXP1 JASPAR yes 67921106
chr5 173339921 173339942 IRF1 JASPAR yes 67921107
Genes associated with rs561413642[chr5:173339921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More