EnhancerDB
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  3. rs561426721[chr12:58282009]
Enhancers that have rs561426721[chr12:58282009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58279727 58295915 enh2398
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 58281637 58282038 vista13680
VISTA
Transcript factors that have rs561426721[chr12:58282009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58281597 58282193 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108040675
chr12 58281601 58282131 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21551616
chr12 58281601 58282131 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108040676
chr12 58281620 58282136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21551617
chr12 58281620 58282136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108040677
chr12 58281751 58282275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21551618
chr12 58281751 58282275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108040678
chr12 58281778 58282248 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21551619
chr12 58281778 58282248 GATA3 UCSC Txn Factor no Conserved 108040679
chr12 58281778 58282248 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108040680
chr12 58281820 58282196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21551620
chr12 58281820 58282196 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108040681
chr12 58281847 58282120 GATA2 UCSC Txn Factor no Conserved 108040683
chr12 58281852 58282162 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21551621
chr12 58281852 58282162 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108040684
chr12 58281853 58282109 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21551622
chr12 58281853 58282109 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108040685
chr12 58281853 58282297 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21551623
chr12 58281853 58282297 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108040686
Genes associated with rs561426721[chr12:58282009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More