EnhancerDB
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  3. rs56146553[chr12:52546812]
Enhancers that have rs56146553[chr12:52546812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs56146553[chr12:52546812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52545847 52546819 ZBTB33 GTRD no Lung (A549) 108033310
chr12 52546150 52547035 ZNF143 GTRD no Epithelial (MCF-7) 21546508
chr12 52546232 52546816 TCF7L2 GTRD no Colon (HCT116) 21546512
chr12 52546652 52547312 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546513
Genes associated with rs56146553[chr12:52546812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More