EnhancerDB
  1. Home
  2. SNP
  3. rs56147006[chr1:55034236]
Enhancers that have rs56147006[chr1:55034236]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56147006[chr1:55034236]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55034230 55034242 YY1 JASPAR yes 28993453
chr1 55034235 55034239 YY1 TRANSFAC yes 28993454
Genes associated with rs56147006[chr1:55034236], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More