EnhancerDB
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  3. rs561484575[chr1:208360064]
Enhancers that have rs561484575[chr1:208360064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs561484575[chr1:208360064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208360047 208360068 IRF1 JASPAR yes 34904887
chr1 208360052 208360073 IRF1 JASPAR yes 34904889
chr1 208360053 208360068 FOXP1 JASPAR yes 34904890
chr1 208360053 208360074 IRF1 JASPAR yes 34904891
chr1 208360054 208360066 FOXC2 JASPAR yes 34904892
chr1 208360054 208360075 IRF1 JASPAR yes 34904893
chr1 208360057 208360072 FOXP1 JASPAR yes 34904895
chr1 208360058 208360073 FOXP1 JASPAR yes 34904896
chr1 208360059 208360074 FOXP1 JASPAR yes 34904897
chr1 208360060 208360075 FOXP1 JASPAR yes 34904898
chr1 208360061 208360076 FOXP1 JASPAR yes 34904899
chr1 208360062 208360077 FOXP1 JASPAR yes 34904900
chr1 208360063 208360078 FOXP1 JASPAR yes 34904901
Genes associated with rs561484575[chr1:208360064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More