EnhancerDB
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  3. rs561488804[chr1:22252369]
Enhancers that have rs561488804[chr1:22252369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561488804[chr1:22252369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22252352 22252373 IRF1 JASPAR yes 27333049
chr1 22252354 22252369 FOXP1 JASPAR yes 27333051
chr1 22252357 22252372 MEF2A JASPAR yes 27333052
chr1 22252358 22252373 FOXP1 JASPAR yes 27333053
chr1 22252358 22252373 MEF2C JASPAR yes 27333054
chr1 22252358 22252379 IRF1 JASPAR yes 27333055
chr1 22252359 22252371 FOXC2 JASPAR yes 27333056
chr1 22252359 22252371 MEF2A JASPAR yes 27333057
chr1 22252359 22252371 MEF2B JASPAR yes 27333058
chr1 22252359 22252371 MEF2D JASPAR yes 27333059
chr1 22252360 22252370 MEF2A JASPAR yes 27333060
chr1 22252362 22252374 IRF1 JASPAR yes 27333062
chr1 22252362 22252376 IRF7 JASPAR yes 27333063
chr1 22252364 22252379 FOXP1 JASPAR yes 27333064
chr1 22252365 22252377 FOXC2 JASPAR yes 27333065
chr1 22252367 22252371 YY1 TRANSFAC yes 27333066
Genes associated with rs561488804[chr1:22252369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More