EnhancerDB
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  3. rs561520141[chr3:176861370]
Enhancers that have rs561520141[chr3:176861370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176855125 176871295 enh7690
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561520141[chr3:176861370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176861365 176861375 ID4 JASPAR yes 7838567
chr3 176861365 176861375 TCF3 JASPAR yes 7838568
chr3 176861365 176861375 TCF4 JASPAR yes 7838569
chr3 176861367 176861372 USF2 TRANSFAC yes 7838570
chr3 176861370 176861384 TLX1 JASPAR yes 7838571
Genes associated with rs561520141[chr3:176861370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More