EnhancerDB
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  3. rs56153380[chr17:48298448]
Enhancers that have rs56153380[chr17:48298448]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56153380[chr17:48298448]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48298438 48298450 TFAP2A JASPAR yes 54688727
chr17 48298438 48298450 TFAP2B JASPAR yes 54688728
chr17 48298438 48298450 TFAP2C JASPAR yes 54688729
chr17 48298438 48298453 TFAP2A JASPAR yes 54688730
chr17 48298438 48298453 TFAP2C JASPAR yes 54688731
chr17 48298440 48298449 TFAP2A JASPAR yes 54688732
chr17 48298445 48298457 TFAP2A JASPAR yes 54688733
chr17 48298445 48298457 TFAP2B JASPAR yes 54688734
chr17 48298445 48298457 TFAP2C JASPAR yes 54688735
chr17 48298446 48298466 ESR1 JASPAR yes 54688736
chr17 48298447 48298456 TFAP2A JASPAR yes 54688737
Genes associated with rs56153380[chr17:48298448], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More