EnhancerDB
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  3. rs561540987[chr17:25795808]
Enhancers that have rs561540987[chr17:25795808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561540987[chr17:25795808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25795805 25795809 NFE TRANSFAC yes 53633173
chr17 25795805 25795810 GATA1 TRANSFAC yes 53633174
chr17 25795805 25795811 GATA3 JASPAR yes 53633175
Genes associated with rs561540987[chr17:25795808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More