EnhancerDB
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  3. rs561541380[chr16:29283365]
Enhancers that have rs561541380[chr16:29283365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561541380[chr16:29283365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29283153 29283729 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108191398
chr16 29283156 29283732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108191399
chr16 29283186 29283726 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108191400
chr16 29283276 29283596 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702089
chr16 29283298 29283574 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702090
chr16 29283305 29283565 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702091
chr16 29283326 29283526 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702092
chr16 29283363 29283375 TFAP2A JASPAR yes 10256544
chr16 29283363 29283375 TFAP2B JASPAR yes 10256545
chr16 29283363 29283375 TFAP2C JASPAR yes 10256546
chr16 29283363 29283378 TFAP2A JASPAR yes 10256547
chr16 29283363 29283378 TFAP2C JASPAR yes 10256548
chr16 29283364 29283375 TFAP2A JASPAR yes 10256549
Genes associated with rs561541380[chr16:29283365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More