EnhancerDB
  1. Home
  2. SNP
  3. rs561542397[chr2:121689073]
Enhancers that have rs561542397[chr2:121689073]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121660105 121703500 enh18849
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561542397[chr2:121689073]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121689072 121689082 GSC2 JASPAR yes 76590461
chr2 121689072 121689082 GSC JASPAR yes 76590462
chr2 121689072 121689089 ZNF410 JASPAR yes 76590463
chr2 121689073 121689081 OTX1 JASPAR yes 76590464
chr2 121689073 121689082 PITX3 JASPAR yes 76590465
Genes associated with rs561542397[chr2:121689073], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More